package com.advaita.license;

interface PathwayOptions {

	static final int maxOrganisms = 18;

	static String[] ORGANISM = { "Homo sapien", "Mus musculus",
			"Rattus novegicus", "Arabidopsis thaliana (Thale cress)",
			"Drosophilla melanogaster (Fruit Fly)",
			"Canis lupus familiaris (Dog)", "Danio rerio (Zebrafish)",
			"Caenorhabiditus elegans (Nematode)", "Gallus gallus (chicken)",
			"Bos taurus (Cow/Bovine)", "Sus scrofa domesticus (Pig)" };

	static String[] MICROARRAY = { "Affymatrix", "Applied Biosystems",
			"HitachiSoft", "Illumina", "Invitrogen", "Miltenyl Biotech",
			"MWG Biotech", "NimbleGen", "Agilent Technologies",
			"Ocimum Biosolutions", "Operon", "Phalanx Biotech",
			"Rosetta Inpharmatics/Merck Parmaceuticals", "Sigma Genosys",
			"SuperArray", "TORAY Industries", "BD Bioscinces Clontech",
			"CapitalBio" };

	static String[] GENEID = { "Entrez", "Gene Symbol", "GeneBank Accession",
			"GeneBank Gis", "Ensemble", "Probe ID" };

	static String[] PATHWAYDB = { "Reactome", "KEGG" };

	static String[] ANALYSIS = { "DE Genes Impact Analysis",
			"DE Genes Coherent Chains of Perturbation",
			"All Genese Impact Analysis", "All Genes with GSA & PADOG" };

	static String[] BLANK = { "Blank" };

	/*
	 * // Below is a test scenario of random selections. Note: The selections
	 * are not always in the same order as the original String Arrays above. //
	 * --
	 * ------------------------------------------------------------------------
	 * ---------------------------------------- static String[] testOrganism = {
	 * "Homo sapien" , "Drosophilla melanogaster (Fruit Fly)" ,
	 * "Gallus gallus (chicken)" }; static String[] testMicroArray = {
	 * "HitachiSoft" , "Operon" , "Applied Biosystems" }; static String[]
	 * testGeneID = { "GeneBank Gis" , "Gene Symbol" }; static String[]
	 * testPathwayDB = { "KEGG" }; static String[] testAnalysis = {
	 * "All Genes with GSA & PADOG" , "All Genese Impact Analysis" };
	 */

}